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Announcement

 

-Gene information for Oryza sativa was changed (August 15, 2010).
The transcript IDs from RAP-DB have been used for gene IDs of Oryza sativa. We changed the gene IDs of it to the locus IDs from RAP-DB so that the correlation data of rice could be represented. The old settings are preserved as the species name "Oryza sativa [RAP-DB transcript]", so your microarray data described as the transcript IDs can be analyzed with it. The data also can be analyzed in the updated "Oryza sativa" by selecting the array type "(RAP-DB transcript)".

- KaPPA-View4 KEGG is available!!
The KEGG pathway maps are now available on KaPPA-View4.

Overview

 

KaPPA-View is a metabolic pathway database which is aimed to better understand metabolic regulation and to generate hypotheses from huge public available 'omics' data, i.e. transcriptome, metabolome and co-expressions of the genes.

Learn More...

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Manuals

Sample data

Tools

System requirements

 

The operation of KaPPA-View4 has been tested in the following computer and browser settings.

 

OS Windows XP / Vista (Microsoft) Mac OS X (Apple)
Browser Internet Explorer 6, 7, 8
Mozilla Firefox 3.0.10
Google Chrome 3.0 		Safari 4.0.4
  *check off the pop-up blocking
Mozilla Firefox 3.5.6
Opera 9.63, 10.10
  *set pop-up enabled. But still the full screen view of the maps does not work.
Plug-in

The Flash Player plug-in 9 or higher (Adobe) must be installed in your browser to view the metabolic maps. If it isn't, please install it from the button below. The SVG Viewer plug-in is no longer required for KaPPA-View4.

get flash player

 

Contact Information

 
Team KaPPA-View e-mail: kappa-view at kazusa.or.jp
Administrator and developing team of KaPPA-View in Kazusa DNA Research Institute. Please send your all inquiries to this e-mail address.
AXIOHELIX Co. Ltd.

e-mail: info at axiohelix.com
All the system programming was carried out by AXIOHELIX.

 
   

 
NEWS
August 15, 2010
Species and Correlation data were modified and added

July 12, 2010
Correlation data of tomato was added
April 1, 2010
KaPPA-View2 and 3 were closed
January 5, 2010
KaPPA-View4 was released
STATISTICS
Species 10
Maps 153
Compounds 1427
Reactions 1434
Genes 
  Arabidopsis 2610
  Rice 3082
  Rice [RAP-DB transcript] 3928
  Tomato 1329
  Lotus japonicus 3311
  Soybean 1725
  Barley 742
  Poplar 2465
  Wheat 921
  Grape 660
  Maize 551
Correlation Data 
  Genes 17
  Metabolites 1